STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGCZZeta-sarcoglycan. (313 aa)    
Predicted Functional Partners:
SGCE
Epsilon-sarcoglycan.
   
 0.786
XYLB
Xylulose kinase.
      
 0.760
AGMO
Alkylglycerol monooxygenase; Belongs to the sterol desaturase family.
   
 
 0.699
SGCB
Beta-sarcoglycan.
   
0.649
SGCA
Alpha-sarcoglycan.
   
 0.648
USP6NL
Rab-GAP TBC domain-containing protein.
      
 0.640
TRIM13
E3 ubiquitin-protein ligase TRIM13.
      
 0.615
ALPK1
Alpha-protein kinase 1.
      
 0.612
TSHR
Thyrotropin receptor; Receptor for the thyroid-stimulating hormone (TSH) or thyrotropin. Also acts as a receptor for the heterodimeric glycoprotein hormone (GPHA2:GPHB5) or thyrostimulin. The activity of this receptor is mediated by G proteins which activate adenylate cyclase. Plays a central role in controlling thyroid cell metabolism. Belongs to the G-protein coupled receptor 1 family. FSH/LSH/TSH subfamily.
      
 0.603
DAG1
Dystroglycan.
    
 0.593
Your Current Organism:
Bos mutus
NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.