STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB4ARas-related protein Rab-4A. (218 aa)    
Predicted Functional Partners:
RBSN
Rabenosyn-5.
    
 0.972
RUFY1
RUN and FYVE domain-containing protein 1.
    
 0.953
TBC1D16
TBC1 domain family member 16.
    
 0.933
ITSN2
Intersectin-2.
    
 0.842
ITSN1
Intersectin-1.
    
 0.757
LOC102269790
Early endosome antigen 1.
    
 0.743
MET
Hepatocyte growth factor receptor.
   
 0.642
MST1R
Macrophage-stimulating protein receptor.
   
 0.642
RABEP1
Rab GTPase-binding effector protein 1.
    
 
 0.635
ARL5A
ADP-ribosylation factor-like protein 5A; Belongs to the small GTPase superfamily. Arf family.
   
  
0.622
Your Current Organism:
Bos mutus
NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.