Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDSN | DSC1 | ENSBMUP00000002677 | ENSBMUP00000015657 | Corneodesmosin. | Desmocollin-1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | 0.794 |
CDSN | DSG1 | ENSBMUP00000002677 | ENSBMUP00000015755 | Corneodesmosin. | Desmoglein-1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | 0.789 |
CDSN | DSP | ENSBMUP00000002677 | ENSBMUP00000026251 | Corneodesmosin. | Desmoplakin. | 0.482 |
CDSN | PKP1 | ENSBMUP00000002677 | ENSBMUP00000006550 | Corneodesmosin. | Plakophilin-1. | 0.459 |
CDSN | PLEC | ENSBMUP00000002677 | ENSBMUP00000030893 | Corneodesmosin. | Poly [ADP-ribose] polymerase. | 0.475 |
DSC1 | CDSN | ENSBMUP00000015657 | ENSBMUP00000002677 | Desmocollin-1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Corneodesmosin. | 0.794 |
DSC1 | DSG1 | ENSBMUP00000015657 | ENSBMUP00000015755 | Desmocollin-1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Desmoglein-1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | 0.849 |
DSC1 | DSG2 | ENSBMUP00000015657 | ENSBMUP00000015844 | Desmocollin-1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Desmoglein-2. | 0.757 |
DSC1 | DSG3 | ENSBMUP00000015657 | ENSBMUP00000015815 | Desmocollin-1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Desmoglein 3. | 0.629 |
DSC1 | DSP | ENSBMUP00000015657 | ENSBMUP00000026251 | Desmocollin-1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Desmoplakin. | 0.784 |
DSC1 | JUP | ENSBMUP00000015657 | ENSBMUP00000023495 | Desmocollin-1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Junction plakoglobin. | 0.892 |
DSC1 | PKP1 | ENSBMUP00000015657 | ENSBMUP00000006550 | Desmocollin-1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Plakophilin-1. | 0.703 |
DSC1 | PKP2 | ENSBMUP00000015657 | ENSBMUP00000006871 | Desmocollin-1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Plakophilin-2. | 0.760 |
DSC1 | PKP3 | ENSBMUP00000015657 | ENSBMUP00000007966 | Desmocollin-1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Plakophilin 3. | 0.731 |
DSC1 | PLEC | ENSBMUP00000015657 | ENSBMUP00000030893 | Desmocollin-1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Poly [ADP-ribose] polymerase. | 0.749 |
DSG1 | CDSN | ENSBMUP00000015755 | ENSBMUP00000002677 | Desmoglein-1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Corneodesmosin. | 0.789 |
DSG1 | DSC1 | ENSBMUP00000015755 | ENSBMUP00000015657 | Desmoglein-1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Desmocollin-1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | 0.849 |
DSG1 | DSP | ENSBMUP00000015755 | ENSBMUP00000026251 | Desmoglein-1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Desmoplakin. | 0.737 |
DSG1 | JUP | ENSBMUP00000015755 | ENSBMUP00000023495 | Desmoglein-1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Junction plakoglobin. | 0.802 |
DSG1 | PKP1 | ENSBMUP00000015755 | ENSBMUP00000006550 | Desmoglein-1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | Plakophilin-1. | 0.814 |
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