Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CXADR | JAML | ENSBMUP00000013113 | ENSBMUP00000016291 | Coxsackievirus and adenovirus receptor-like protein. | Junctional adhesion molecule-like protein. | 0.990 |
ENSBMUP00000002360 | GRAMD1B | ENSBMUP00000002360 | ENSBMUP00000023786 | annotation not available | GRAM domain-containing protein 1B. | 0.619 |
ENSBMUP00000002360 | JAML | ENSBMUP00000002360 | ENSBMUP00000016291 | annotation not available | Junctional adhesion molecule-like protein. | 0.514 |
GRAMD1A | JAML | ENSBMUP00000007344 | ENSBMUP00000016291 | GRAM domain-containing protein 1A. | Junctional adhesion molecule-like protein. | 0.514 |
GRAMD1A | SCN1B | ENSBMUP00000007344 | ENSBMUP00000007369 | GRAM domain-containing protein 1A. | Sodium channel subunit beta-1. | 0.480 |
GRAMD1B | ENSBMUP00000002360 | ENSBMUP00000023786 | ENSBMUP00000002360 | GRAM domain-containing protein 1B. | annotation not available | 0.619 |
GRAMD1B | JAML | ENSBMUP00000023786 | ENSBMUP00000016291 | GRAM domain-containing protein 1B. | Junctional adhesion molecule-like protein. | 0.514 |
GRAMD1C | GRAMD2B | ENSBMUP00000020952 | ENSBMUP00000031923 | GRAM domain containing 1C. | GRAM domain-containing protein 3. | 0.475 |
GRAMD1C | JAML | ENSBMUP00000020952 | ENSBMUP00000016291 | GRAM domain containing 1C. | Junctional adhesion molecule-like protein. | 0.514 |
GRAMD2A | JAML | ENSBMUP00000009676 | ENSBMUP00000016291 | GRAM domain containing 2. | Junctional adhesion molecule-like protein. | 0.514 |
GRAMD2B | GRAMD1C | ENSBMUP00000031923 | ENSBMUP00000020952 | GRAM domain-containing protein 3. | GRAM domain containing 1C. | 0.475 |
GRAMD2B | JAML | ENSBMUP00000031923 | ENSBMUP00000016291 | GRAM domain-containing protein 3. | Junctional adhesion molecule-like protein. | 0.514 |
JAML | CXADR | ENSBMUP00000016291 | ENSBMUP00000013113 | Junctional adhesion molecule-like protein. | Coxsackievirus and adenovirus receptor-like protein. | 0.990 |
JAML | ENSBMUP00000002360 | ENSBMUP00000016291 | ENSBMUP00000002360 | Junctional adhesion molecule-like protein. | annotation not available | 0.514 |
JAML | GRAMD1A | ENSBMUP00000016291 | ENSBMUP00000007344 | Junctional adhesion molecule-like protein. | GRAM domain-containing protein 1A. | 0.514 |
JAML | GRAMD1B | ENSBMUP00000016291 | ENSBMUP00000023786 | Junctional adhesion molecule-like protein. | GRAM domain-containing protein 1B. | 0.514 |
JAML | GRAMD1C | ENSBMUP00000016291 | ENSBMUP00000020952 | Junctional adhesion molecule-like protein. | GRAM domain containing 1C. | 0.514 |
JAML | GRAMD2A | ENSBMUP00000016291 | ENSBMUP00000009676 | Junctional adhesion molecule-like protein. | GRAM domain containing 2. | 0.514 |
JAML | GRAMD2B | ENSBMUP00000016291 | ENSBMUP00000031923 | Junctional adhesion molecule-like protein. | GRAM domain-containing protein 3. | 0.514 |
JAML | LNX2 | ENSBMUP00000016291 | ENSBMUP00000031152 | Junctional adhesion molecule-like protein. | Ligand of Numb protein X 2. | 0.606 |
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