STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATG16L2Autophagy-related protein 16-2. (637 aa)    
Predicted Functional Partners:
ATG12
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
    
 0.939
ATG5
Autophagy protein 5; Involved in autophagic vesicle formation.
   
 0.937
ATG3
Autophagy-related protein 3.
   
 0.917
WIPI1
WD repeat domain, phosphoinositide interacting 1.
   
 0.878
CSNK1G1
Casein kinase 1 gamma 1.
      
 0.854
WIPI2
WD repeat domain phosphoinositide-interacting protein 2.
   
 0.835
PIF1
ATP-dependent DNA helicase PIF1.
      
 0.834
WARS2
Tryptophanyl-tRNA synthetase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.818
OAZ2
Ornithine decarboxylase antizyme 2.
      
 0.776
RAB33B
Ras-related protein Rab-33B.
    
 
 0.762
Your Current Organism:
Bos mutus
NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.