STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYMPKSymplekin. (1272 aa)    
Predicted Functional Partners:
CPSF3
Cleavage and polyadenylation specificity factor subunit 3.
   
 0.999
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.999
FIP1L1
Pre-mRNA 3'-end-processing factor FIP1.
   
 0.998
CPSF4
Cleavage and polyadenylation specificity factor subunit 4.
   
 0.998
WDR33
WD repeat-containing protein 33.
    
 0.998
CPSF1
Cleavage and polyadenylation specificity factor subunit 1.
    
 0.998
CSTF3
Cleavage stimulation factor subunit 3.
    
 0.996
PCF11
PCF11 cleavage and polyadenylation factor subunit.
    
 0.989
WDR82
WD repeat-containing protein 82.
   
 
 0.974
CSTF2
Cleavage stimulation factor subunit 2.
   
 0.971
Your Current Organism:
Bos mutus
NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.