STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATAD2ATranscriptional repressor p66-alpha. (639 aa)    
Predicted Functional Partners:
CHD4
Chromodomain-helicase-DNA-binding protein 4.
   
 0.959
CHD3
Chromodomain-helicase-DNA-binding protein 3.
   
 0.946
MTA3
Metastasis-associated protein MTA3.
   
 0.942
MTA2
Metastasis associated 1 family member 2.
   
 0.920
RBBP7
Histone-binding protein RBBP7.
   
 0.909
MBD3
Methyl-CpG-binding domain protein 3.
   
 0.901
ENSBMUP00000031008
annotation not available
   
 0.884
RBBP4
Histone-binding protein RBBP4.
   
 0.873
MTA1-2
Metastasis-associated protein MTA.
   
 0.862
MTA1
Metastasis-associated protein MTA1.
   
 0.862
Your Current Organism:
Bos mutus
NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.