STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA13Spermatogenesis associated 13. (652 aa)    
Predicted Functional Partners:
CDC42
Cell division control protein 42-like protein.
    
 0.738
GABRA2
Gamma-aminobutyric acid type A receptor alpha2 subunit.
   
 
 0.543
RAC1
Ras-related C3 botulinum toxin substrate 1.
    
 0.516
RAC2
Ras-related C3 botulinum toxin substrate 2.
    
 0.516
RAC3
Rac family small GTPase 3.
    
 0.516
RHOG
Rho-related GTP-binding protein RhoG.
    
 0.489
RHOU
Rho-related GTP-binding protein RhoU.
    
 0.489
RHOV
Rho-related GTP-binding protein RhoV.
    
 0.489
ITSN2
Intersectin-2.
    
0.487
ITSN1
Intersectin-1.
    
0.481
Your Current Organism:
Bos mutus
NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.