Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AASDH | ENSBMUP00000028949 | ENSBMUP00000009272 | ENSBMUP00000028949 | Acyl-CoA synthetase family member 4. | annotation not available | 0.534 |
AASDH | HSDL2 | ENSBMUP00000009272 | ENSBMUP00000008422 | Acyl-CoA synthetase family member 4. | Hydroxysteroid dehydrogenase-like protein 2. | 0.469 |
AASDH | NDUFAB1 | ENSBMUP00000009272 | ENSBMUP00000030280 | Acyl-CoA synthetase family member 4. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.949 |
AASDH | PALB2 | ENSBMUP00000009272 | ENSBMUP00000030316 | Acyl-CoA synthetase family member 4. | PALB2_WD40 domain-containing protein. | 0.949 |
ENSBMUP00000021507 | ENSBMUP00000028949 | ENSBMUP00000021507 | ENSBMUP00000028949 | annotation not available | annotation not available | 0.534 |
ENSBMUP00000021507 | HSDL2 | ENSBMUP00000021507 | ENSBMUP00000008422 | annotation not available | Hydroxysteroid dehydrogenase-like protein 2. | 0.469 |
ENSBMUP00000021507 | NDUFAB1 | ENSBMUP00000021507 | ENSBMUP00000030280 | annotation not available | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.949 |
ENSBMUP00000021507 | PALB2 | ENSBMUP00000021507 | ENSBMUP00000030316 | annotation not available | PALB2_WD40 domain-containing protein. | 0.949 |
ENSBMUP00000028949 | AASDH | ENSBMUP00000028949 | ENSBMUP00000009272 | annotation not available | Acyl-CoA synthetase family member 4. | 0.534 |
ENSBMUP00000028949 | ENSBMUP00000021507 | ENSBMUP00000028949 | ENSBMUP00000021507 | annotation not available | annotation not available | 0.534 |
ENSBMUP00000028949 | HSDL2 | ENSBMUP00000028949 | ENSBMUP00000008422 | annotation not available | Hydroxysteroid dehydrogenase-like protein 2. | 0.604 |
ENSBMUP00000028949 | MED14 | ENSBMUP00000028949 | ENSBMUP00000016136 | annotation not available | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.490 |
ENSBMUP00000028949 | MED17 | ENSBMUP00000028949 | ENSBMUP00000023192 | annotation not available | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.463 |
ENSBMUP00000028949 | MED23 | ENSBMUP00000028949 | ENSBMUP00000029558 | annotation not available | Mediator of RNA polymerase II transcription subunit 23. | 0.492 |
ENSBMUP00000028949 | NDUFAB1 | ENSBMUP00000028949 | ENSBMUP00000030280 | annotation not available | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.523 |
ENSBMUP00000028949 | NUP205 | ENSBMUP00000028949 | ENSBMUP00000001233 | annotation not available | Nuclear pore complex protein Nup205. | 0.476 |
ENSBMUP00000028949 | NUP93 | ENSBMUP00000028949 | ENSBMUP00000029686 | annotation not available | Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. | 0.479 |
ENSBMUP00000028949 | PALB2 | ENSBMUP00000028949 | ENSBMUP00000030316 | annotation not available | PALB2_WD40 domain-containing protein. | 0.523 |
HSDL2 | AASDH | ENSBMUP00000008422 | ENSBMUP00000009272 | Hydroxysteroid dehydrogenase-like protein 2. | Acyl-CoA synthetase family member 4. | 0.469 |
HSDL2 | ENSBMUP00000021507 | ENSBMUP00000008422 | ENSBMUP00000021507 | Hydroxysteroid dehydrogenase-like protein 2. | annotation not available | 0.469 |
page 1 of 3