Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HNRNPL | KHDRBS1 | ENSBMUP00000019120 | ENSBMUP00000011264 | Heterogeneous nuclear ribonucleoprotein L. | KH domain-containing, RNA-binding, signal transduction-associated protein 1. | 0.464 |
HNRNPL | PTBP2 | ENSBMUP00000019120 | ENSBMUP00000029056 | Heterogeneous nuclear ribonucleoprotein L. | Polypyrimidine tract-binding protein 2. | 0.649 |
HNRNPL | SFPQ | ENSBMUP00000019120 | ENSBMUP00000028672 | Heterogeneous nuclear ribonucleoprotein L. | Splicing factor, proline-and glutamine-rich. | 0.536 |
HNRNPL | SRSF1 | ENSBMUP00000019120 | ENSBMUP00000002831 | Heterogeneous nuclear ribonucleoprotein L. | Serine and arginine rich splicing factor 1. | 0.789 |
HNRNPL | SRSF7 | ENSBMUP00000019120 | ENSBMUP00000007530 | Heterogeneous nuclear ribonucleoprotein L. | Serine/arginine-rich splicing factor 7. | 0.674 |
HNRNPLL | PTBP2 | ENSBMUP00000007466 | ENSBMUP00000029056 | Heterogeneous nuclear ribonucleoprotein L-like protein. | Polypyrimidine tract-binding protein 2. | 0.649 |
HNRNPLL | SRSF1 | ENSBMUP00000007466 | ENSBMUP00000002831 | Heterogeneous nuclear ribonucleoprotein L-like protein. | Serine and arginine rich splicing factor 1. | 0.632 |
HNRNPLL | SRSF7 | ENSBMUP00000007466 | ENSBMUP00000007530 | Heterogeneous nuclear ribonucleoprotein L-like protein. | Serine/arginine-rich splicing factor 7. | 0.595 |
KHDRBS1 | HNRNPL | ENSBMUP00000011264 | ENSBMUP00000019120 | KH domain-containing, RNA-binding, signal transduction-associated protein 1. | Heterogeneous nuclear ribonucleoprotein L. | 0.464 |
KHDRBS1 | NOVA1 | ENSBMUP00000011264 | ENSBMUP00000015324 | KH domain-containing, RNA-binding, signal transduction-associated protein 1. | RNA-binding protein Nova-1. | 0.433 |
KHDRBS1 | PTBP2 | ENSBMUP00000011264 | ENSBMUP00000029056 | KH domain-containing, RNA-binding, signal transduction-associated protein 1. | Polypyrimidine tract-binding protein 2. | 0.617 |
KHDRBS1 | SRSF1 | ENSBMUP00000011264 | ENSBMUP00000002831 | KH domain-containing, RNA-binding, signal transduction-associated protein 1. | Serine and arginine rich splicing factor 1. | 0.616 |
KHDRBS1 | SRSF7 | ENSBMUP00000011264 | ENSBMUP00000007530 | KH domain-containing, RNA-binding, signal transduction-associated protein 1. | Serine/arginine-rich splicing factor 7. | 0.439 |
MEX3B | NOVA1 | ENSBMUP00000008610 | ENSBMUP00000015324 | RNA-binding protein MEX3B. | RNA-binding protein Nova-1. | 0.568 |
MEX3B | PTBP2 | ENSBMUP00000008610 | ENSBMUP00000029056 | RNA-binding protein MEX3B. | Polypyrimidine tract-binding protein 2. | 0.631 |
NOVA1 | KHDRBS1 | ENSBMUP00000015324 | ENSBMUP00000011264 | RNA-binding protein Nova-1. | KH domain-containing, RNA-binding, signal transduction-associated protein 1. | 0.433 |
NOVA1 | MEX3B | ENSBMUP00000015324 | ENSBMUP00000008610 | RNA-binding protein Nova-1. | RNA-binding protein MEX3B. | 0.568 |
NOVA1 | PTBP2 | ENSBMUP00000015324 | ENSBMUP00000029056 | RNA-binding protein Nova-1. | Polypyrimidine tract-binding protein 2. | 0.632 |
NOVA1 | RBFOX1 | ENSBMUP00000015324 | ENSBMUP00000026588 | RNA-binding protein Nova-1. | Fox-1-like protein A. | 0.526 |
NOVA1 | RBFOX2 | ENSBMUP00000015324 | ENSBMUP00000019247 | RNA-binding protein Nova-1. | RNA-binding protein 9. | 0.465 |
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