STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC1BStructural maintenance of chromosomes protein 1B. (1235 aa)    
Predicted Functional Partners:
SMC3
Structural maintenance of chromosomes protein 3.
   
0.995
RAD21
Double-strand-break repair protein rad21-like protein.
   
 0.988
STAG1
Cohesin subunit SA-1.
   
 0.979
STAG2
Cohesin subunit SA-2.
   
 0.977
ESPL1
Separin.
   
 0.970
PDS5B
Sister chromatid cohesion protein PDS5.
   
 0.966
STAG3
Cohesin complex subunit SA-3.
   
 0.962
SMC1A
Structural maintenance of chromosomes protein.
  
 
0.955
REC8
Meiotic recombination protein REC8-like protein.
   
 0.954
RAD21L1
Double-strand-break repair protein rad21-like protein 1.
   
 0.944
Your Current Organism:
Bos mutus
NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.