STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LEMD1LEM domain-containing protein 1. (180 aa)    
Predicted Functional Partners:
TSGA10
Testis-specific 10 protein.
      
 0.608
SPATA19
Spermatogenesis-associated protein 19, mitochondrial.
      
 0.603
TEX101
Testis-expressed protein 101.
      
 0.591
ZBTB7C
Zinc finger and BTB domain-containing protein 7C.
      
 0.574
COL25A1
Collagen alpha-1(XXV) chain.
      
 0.563
LEPROT
Leptin receptor related protein.
      
 0.538
PSIP1
PC4 and SFRS1-interacting protein.
      
 0.518
ODF3
Outer dense fiber protein 3.
      
 0.463
ARCN1
Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
      
 0.459
COCH
Cochlin.
      
 0.459
Your Current Organism:
Bos mutus
NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.