STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBMUP00000035823annotation not available (262 aa)    
Predicted Functional Partners:
ACIN1
Apoptotic chromatin condensation inducer in the nucleus.
   
 0.944
UPF2
Regulator of nonsense transcripts 2.
    
 0.932
PNN
Pinin.
   
 0.903
EIF4A3
Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family.
   
 0.903
ENSBMUP00000020485
annotation not available
   
 0.896
SAP18
Histone deacetylase complex subunit SAP18.
   
 0.896
RBM8A
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.849
ALYREF
THO complex subunit 4.
   
 0.830
UPF1
Regulator of nonsense transcripts 1.
    
 0.822
UPF3B
Regulator of nonsense transcripts 3B.
   
 0.805
Your Current Organism:
Bos mutus
NCBI taxonomy Id: 72004
Other names: B. mutus, Bos grunniens mutus, Poephagus mutus, wild yak
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.