STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV66810.1PFAM: ATPase family associated with various cellular activities (AAA). (316 aa)    
Predicted Functional Partners:
AEV66809.1
PFAM: Protein of unknown function DUF58.
 
  
 0.925
AEV66807.1
PFAM: von Willebrand factor type A domain; TIGRFAM: N-terminal double-transmembrane domain.
 
  
 0.888
AEV66806.1
Mg-chelatase subunit ChlD; PFAM: von Willebrand factor type A domain; manually curated.
 
  
 0.842
AEV66804.1
Hypothetical protein.
 
   
 0.727
AEV66808.1
Hypothetical protein.
       0.719
AEV66805.1
Hypothetical protein; Manually curated.
 
     0.706
AEV68124.1
PFAM: Protein of unknown function DUF58.
 
  
 0.590
AEV67173.1
PFAM: Protein of unknown function DUF58.
 
  
 0.570
AEV67712.1
PFAM: Protein of unknown function DUF58.
 
  
 0.452
AEV67265.1
Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Transglutaminase-like superfamily.
 
  
 0.418
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.