STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV66814.1Putative metal-dependent membrane protease; PFAM: CAAX amino terminal protease family. (359 aa)    
Predicted Functional Partners:
AEV67258.1
PFAM: Protein of unknown function (DUF1624).
  
    0.509
AEV70435.1
Hypothetical protein.
 
     0.494
AEV70423.1
Hypothetical protein.
  
     0.475
AEV68809.1
ADP-ribose pyrophosphatase; PFAM: NUDIX domain.
 
     0.469
AEV67281.1
ABC-type Na+ efflux pump, permease component; PFAM: ABC-2 type transporter.
  
 0.433
AEV69582.1
Hypothetical protein.
   
  
 0.417
AEV70029.1
Putative membrane protein; PFAM: ABC-2 type transporter.
   
  
 0.417
AEV66813.1
TIGRFAM: germination protein YpeB.
       0.405
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.