STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV66815.1DNA replication protein; PFAM: IstB-like ATP binding protein. (347 aa)    
Predicted Functional Partners:
AEV66816.1
DnaD-like protein; PFAM: Replication initiation and membrane attachment protein (DnaB); TIGRFAM: DnaD and phage-associated domain.
 
  
 0.916
AEV67876.1
Hypothetical protein.
  
     0.751
AEV66876.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.685
AEV70423.1
Hypothetical protein.
  
     0.627
AEV70419.1
PFAM: HhH-GPD superfamily base excision DNA repair protein; 8-oxoguanine DNA glycosylase, N-terminal domain; TIGRFAM: 8-oxoguanine DNA-glycosylase (ogg).
  
     0.592
AEV68724.1
PFAM: Radical SAM superfamily; TIGRFAM: six-Cys-in-45 modification radical SAM protein; radical SAM additional 4Fe4S-binding domain.
  
     0.546
AEV70435.1
Hypothetical protein.
  
     0.541
AEV69521.1
PFAM: YbbR-like protein.
 
     0.524
AEV68833.1
Hypothetical protein.
  
     0.496
AEV68809.1
ADP-ribose pyrophosphatase; PFAM: NUDIX domain.
  
     0.494
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.