STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV66911.1ATPase involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (277 aa)    
Predicted Functional Partners:
AEV66915.1
Hypothetical protein; PFAM: Dinitrogenase iron-molybdenum cofactor.
  
 0.912
AEV66912.1
Hypothetical protein; PFAM: Dinitrogenase iron-molybdenum cofactor.
 
  
 0.804
AEV66913.1
P-loop ATPase, MinD superfamily; PFAM: 4Fe-4S binding domain; CobQ/CobB/MinD/ParA nucleotide binding domain.
 
 
 
 0.795
AEV66914.1
P-loop ATPase, MinD superfamily; PFAM: 4Fe-4S binding domain; CobQ/CobB/MinD/ParA nucleotide binding domain.
 
 
 
 0.792
AEV66917.1
Putative DNA-binding protein; PFAM: Protein of unknown function DUF134; Belongs to the UPF0251 family.
 
    0.748
AEV66916.1
Fe2+/Zn2+ uptake regulation protein; PFAM: Ferric uptake regulator family; Belongs to the Fur family.
 
     0.677
AEV69575.1
PFAM: Helix-hairpin-helix motif; SLBB domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; comEA protein.
  
 
 0.629
AEV69345.1
PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; manually curated.
  
  
 0.581
AEV69371.1
PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.581
AEV67683.1
Capsular polysaccharide biosynthesis protein; PFAM: Chain length determinant protein.
  
 
 0.570
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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