STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV66953.1PFAM: TnsA endonuclease N terminal; TnsA endonuclease C terminal. (284 aa)    
Predicted Functional Partners:
AEV66955.1
PFAM: Bacterial TniB protein.
 
 
 
 0.977
AEV66954.1
PFAM: Mu transposase, C-terminal; Integrase core domain.
  
 0.953
AEV66956.1
Hypothetical protein.
 
   
 0.951
AEV67019.1
Hypothetical protein; Manually curated.
 
 
 
 0.903
AEV69491.1
Hypothetical protein.
 
   
 0.793
AEV67018.1
Integrase family protein; PFAM: Integrase core domain.
 
  
 0.791
AEV67020.1
Hypothetical protein.
 
   
 0.791
AEV69492.1
PFAM: Mu transposase, C-terminal; manually curated.
  
 0.791
AEV69493.1
Integrase family protein; PFAM: Integrase core domain.
 
  
 0.791
AEV69507.1
PFAM: S23 ribosomal protein.
  
     0.631
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.