Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEV66973.1Putative transcriptional regulator with HTH domain; PFAM: Divergent AAA domain. (381 aa)    
Predicted Functional Partners:
AEV69187.1
PFAM: CRISPR-associated protein (Cas_CXXC_CXXC); TIGRFAM: CRISPR-associated protein Cas8a1/Cst1, subtype I-B/TNEAP; manually curated.
  
     0.609
AEV66977.1
Lactoylglutathione lyase-like lyase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
 
     0.525
AEV66976.1
PFAM: Nucleotidyltransferase domain.
 
     0.497
AEV66974.1
Hypothetical protein.
       0.486
AEV69186.1
TIGRFAM: CRISPR-associated autoregulator DevR family; CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP.
 
   
 0.461
AEV66924.1
Hypothetical protein; Manually curated.
  
     0.458
AEV66982.1
Actin-like ATPase involved in cell division; PFAM: StbA protein.
  
     0.458
AEV69185.1
CRISPR-associated protein, Cas5t family; PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5, subtype I-B/TNEAP; CRISPR-associated protein Cas5, N-terminal domain.
 
     0.429
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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