STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV66974.1Hypothetical protein. (104 aa)    
Predicted Functional Partners:
AEV70105.1
Hypothetical protein; PFAM: Type III restriction enzyme, res subunit.
  
     0.586
AEV66976.1
PFAM: Nucleotidyltransferase domain.
 
     0.570
AEV66975.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
       0.563
AEV66973.1
Putative transcriptional regulator with HTH domain; PFAM: Divergent AAA domain.
       0.486
AEV66977.1
Lactoylglutathione lyase-like lyase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
 
     0.472
AEV70143.1
PFAM: Transposase.
  
     0.466
AEV69847.1
DNA-binding domain-containing protein, AraC-type; PFAM: Phosphotransferase enzyme family.
  
     0.435
AEV66978.1
Hypothetical protein.
 
     0.415
AEV67422.1
Hypothetical protein.
  
     0.415
AEV70500.1
Hypothetical protein.
  
     0.404
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.