STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV66998.1Hypothetical protein. (336 aa)    
Predicted Functional Partners:
AEV66945.1
Hypothetical protein.
  
     0.764
AEV67007.1
Hypothetical protein.
  
     0.764
AEV67004.1
PFAM: Helix-turn-helix.
 
     0.757
AEV66924.1
Hypothetical protein; Manually curated.
  
     0.755
AEV66999.1
PFAM: ADP-ribosylglycohydrolase; TIGRFAM: ADP-ribosyl-[dinitrogen reductase] hydrolase.
 
     0.745
AEV66949.1
Hypothetical protein.
  
     0.741
AEV67005.1
Putative Zn peptidase; PFAM: Domain of unknown function (DUF955).
 
     0.734
AEV66986.1
DNA primase; PFAM: CHC2 zinc finger.
  
     0.719
AEV68265.1
PFAM: Transposase IS66 family; Insertion element protein.
  
     0.676
AEV69693.1
PFAM: Transposase IS66 family; Insertion element protein.
  
     0.676
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.