STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV67118.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Bacterial extracellular solute-binding protein. (447 aa)    
Predicted Functional Partners:
AEV68682.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.886
AEV67902.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.882
AEV69084.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.882
AEV69083.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.857
AEV67117.1
PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family; manually curated.
 
   
 0.817
AEV67216.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter; TOBE domain.
 
 
 0.810
AEV67116.1
Putative signal transduction protein with a C-terminal ATPase domain; PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
  
 0.763
AEV68683.1
ABC-type polysaccharide transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  
 0.691
AEV67901.1
ABC-type polysaccharide transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  
 0.624
AEV69205.1
PFAM: Family 4 glycosyl hydrolase; Family 4 glycosyl hydrolase C-terminal domain.
 
    0.606
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.