STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV67191.1Large extracellular alpha-helical protein; PFAM: Alpha-2-macroglobulin family; Dockerin type I repeat; Alpha-2-macroglobulin family N-terminal region. (1717 aa)    
Predicted Functional Partners:
AEV68122.1
Hypothetical protein.
  
     0.704
AEV68387.1
Uncharacterized protein containing chitin-binding domain type 3; PFAM: S-layer homology domain; PKD domain; Fibronectin type III domain.
  
     0.665
AEV67436.1
Hypothetical protein.
  
     0.660
AEV69680.1
Chromosome segregation ATPase; Manually curated.
  
    0.631
AEV69658.1
Putative ATPase; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; NB-ARC domain.
  
 
   0.608
AEV69682.1
Hypothetical protein.
  
     0.592
AEV68592.1
PFAM: Domain of unknown function (DUF1877).
  
     0.568
AEV68121.1
Hypothetical protein.
  
     0.556
nrdR
Transcriptional regulator NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.
    
   0.525
AEV67576.1
PFAM: Copper amine oxidase N-terminal domain.
  
 
   0.494
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.