STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV67195.1Hypothetical protein. (393 aa)    
Predicted Functional Partners:
AEV67194.1
PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
 
 
   0.714
AEV68765.1
PFAM: RAMP superfamily.
  
     0.693
AEV67571.1
PFAM: Copper amine oxidase N-terminal domain.
  
 
   0.686
AEV67721.1
Beta-propeller domain-containing protein, methanol dehydrogenase; PFAM: S-layer homology domain.
  
   0.685
AEV67196.1
DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase.
   
   0.683
AEV68762.1
PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated protein; manually curated.
  
   
 0.676
AEV69932.1
PFAM: Copper amine oxidase N-terminal domain.
  
 
   0.675
AEV67440.1
Hypothetical protein.
  
   0.671
AEV69997.1
Hypothetical protein.
  
 
 
 0.654
AEV69119.1
Hypothetical protein.
  
 
   0.651
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.