STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV67210.1PFAM: Acetyltransferase (GNAT) family. (158 aa)    
Predicted Functional Partners:
AEV67211.1
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
       0.781
argD
Acetylornithine aminotransferase apoenzyme; PFAM: Aminotransferase class-III; TIGRFAM: ornithine aminotransferase; acetylornithine and succinylornithine aminotransferases; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
       0.701
AEV69809.1
PFAM: Cellulose binding domain; Cohesin domain.
  
    0.657
AEV66816.1
DnaD-like protein; PFAM: Replication initiation and membrane attachment protein (DnaB); TIGRFAM: DnaD and phage-associated domain.
  
     0.648
AEV67623.1
Putative integral membrane protein; PFAM: Protein of unknown function, DUF624; manually curated.
 
     0.626
AEV67349.1
Hypothetical protein.
  
     0.625
AEV67437.1
Hypothetical protein.
 
     0.621
AEV69103.1
Hypothetical protein.
 
     0.607
AEV68553.1
PFAM: Flagellar biosynthesis protein, FliO; TIGRFAM: flagellar biosynthetic protein FliO.
  
     0.592
AEV67386.1
PFAM: Protein of unknown function (DUF402).
  
     0.573
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.