STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV67245.1Copper amine oxidase family protein,LysM domain-containing protein,SH3 domain-containing protein; PFAM: Copper amine oxidase N-terminal domain; Bacterial SH3 domain; LysM domain. (503 aa)    
Predicted Functional Partners:
AEV68357.1
LysM domain-containing protein; PFAM: LysM domain.
  
     0.631
AEV67244.1
PFAM: N-acetylmuramoyl-L-alanine amidase; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD.
     
 0.486
AEV67025.1
Hypothetical protein.
  
   0.455
AEV67466.1
Protein possibly involved in post-translational modification of quorum-sensing peptides; PFAM: Accessory gene regulator B; manually curated.
  
     0.442
AEV66786.1
Spore coat protein, CotS family; PFAM: Choline/ethanolamine kinase; TIGRFAM: spore coat protein, CotS family.
 
   
 0.422
AEV69736.1
PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease).
  
     0.408
AEV67880.1
Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase.
  
   
 0.404
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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