STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV67258.1PFAM: Protein of unknown function (DUF1624). (232 aa)    
Predicted Functional Partners:
AEV67257.1
Hypothetical protein.
       0.773
AEV67256.1
PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain.
       0.671
AEV66814.1
Putative metal-dependent membrane protease; PFAM: CAAX amino terminal protease family.
  
    0.509
AEV68865.1
PFAM: CAAX amino terminal protease family.
  
    0.509
AEV70389.1
Putative metal-dependent membrane protease; PFAM: CAAX amino terminal protease family.
  
    0.509
AEV69157.1
PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, clade II.
       0.422
AEV69535.1
Hypothetical protein; PFAM: Uncharacterised ACR, YagE family COG1723.
  
     0.418
AEV66838.1
Putative glycosyl hydrolase; PFAM: Copper amine oxidase N-terminal domain; Glycosyl hydrolases family 18.
  
     0.416
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.