STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV67324.1Hypothetical protein. (457 aa)    
Predicted Functional Partners:
AEV67323.1
TM2 domain-containing protein; PFAM: TM2 domain.
 
    0.878
AEV67321.1
PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
 
    0.731
AEV67322.1
Hypothetical protein.
       0.705
AEV67769.1
Hypothetical protein; Manually curated.
 
  
 0.530
AEV67768.1
Putative stress-responsive transcriptional regulator; PFAM: PspC domain; manually curated.
 
  
 0.521
AEV70446.1
Putative stress-responsive transcriptional regulator; PFAM: PspC domain.
 
  
 0.511
AEV69233.1
Hypothetical protein.
    
   0.445
AEV69670.1
Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).
    
   0.445
AEV69957.1
Putative low-complexity protein; PFAM: Pentapeptide repeats (8 copies).
    
   0.445
AEV70418.1
PFAM: Membrane protein of unknown function.
  
  
 0.431
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.