STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV67337.1Putative S-layer protein; PFAM: S-layer homology domain. (988 aa)    
Predicted Functional Partners:
AEV67338.1
Putative S-layer protein; PFAM: S-layer homology domain.
 
     0.925
AEV67025.1
Hypothetical protein.
  
     0.769
AEV69103.1
Hypothetical protein.
  
     0.768
AEV68617.1
Hypothetical protein; TIGRFAM: putative membrane fusion protein.
  
     0.760
AEV70451.1
Hypothetical protein; Manually curated.
  
     0.757
AEV70601.1
PFAM: YycH protein.
  
     0.755
AEV68857.1
PFAM: Copper amine oxidase N-terminal domain.
  
     0.751
AEV67724.1
Dockerin-like protein; PFAM: Dockerin type I repeat; manually curated.
  
     0.750
AEV70507.1
PFAM: FlgN protein.
  
     0.745
AEV66816.1
DnaD-like protein; PFAM: Replication initiation and membrane attachment protein (DnaB); TIGRFAM: DnaD and phage-associated domain.
  
     0.742
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
Server load: medium (68%) [HD]