Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
AEV67347.1Hypothetical protein. (238 aa)    
Predicted Functional Partners:
AEV67348.1
PFAM: ABC-type uncharacterized transport system.
  
 0.978
AEV67346.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.968
AEV67349.1
Hypothetical protein.
 
     0.935
AEV68487.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.511
AEV67169.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.495
AEV67469.1
PFAM: ABC transporter; TIGRFAM: gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit.
 
 
 0.470
AEV67350.1
Putative membrane protein.
       0.430
AEV70030.1
PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit.
  
 
 0.429
AEV67345.1
Sarco/endoplasmic reticulum calcium-translocating P-type ATPase; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; potassium and/or sodium efflux P-type ATPase, fungal-type; sarco/endoplasmic reticulum calcium-translocating P-type ATPase.
  
    0.409
AEV68327.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
 
 0.407
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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