STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV67350.1Putative membrane protein. (377 aa)    
Predicted Functional Partners:
AEV70422.1
PFAM: YtxC-like family; TIGRFAM: putative sporulation protein YtxC.
 
     0.695
AEV67351.1
Hypothetical protein.
 
     0.614
AEV67352.1
Putative membrane protein, required for colicin V production; PFAM: Colicin V production protein.
 
     0.614
AEV68668.1
PFAM: Stage III sporulation protein AE (spore_III_AE); TIGRFAM: stage III sporulation protein AE.
  
    0.551
AEV67349.1
Hypothetical protein.
 
     0.526
AEV70451.1
Hypothetical protein; Manually curated.
  
     0.505
AEV67113.1
PFAM: Stage II sporulation protein E (SpoIIE); TIGRFAM: stage II sporulation protein E.
  
     0.492
AEV69941.1
PFAM: Stage II sporulation protein E (SpoIIE); TIGRFAM: stage II sporulation protein E.
  
     0.462
AEV67347.1
Hypothetical protein.
       0.435
AEV68106.1
PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease).
  
     0.432
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.