STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV67383.1Putative Fe-S oxidoreductase; PFAM: Radical SAM superfamily; PDZ domain (Also known as DHR or GLGF); Protein of unknown function (DUF512). (444 aa)    
Predicted Functional Partners:
AEV70023.1
Protein possibly involved in post-translational modification of quorum-sensing peptides; PFAM: Accessory gene regulator B.
  
     0.649
AEV68074.1
PFAM: Carbohydrate binding domain (family 25).
  
     0.617
AEV70281.1
PFAM: Carbohydrate binding domain (family 25).
  
     0.611
AEV69422.1
PFAM: Carbohydrate binding domain (family 25).
  
     0.563
AEV68978.1
Hypothetical protein.
  
     0.544
AEV69231.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme.
  
  
 0.504
AEV70143.1
PFAM: Transposase.
  
     0.495
AEV70552.1
Hypothetical protein.
  
     0.488
AEV69489.1
Hypothetical protein.
  
     0.419
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.