STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV67438.1Hypothetical protein. (350 aa)    
Predicted Functional Partners:
AEV67437.1
Hypothetical protein.
 
     0.958
AEV67724.1
Dockerin-like protein; PFAM: Dockerin type I repeat; manually curated.
  
     0.769
AEV69103.1
Hypothetical protein.
  
     0.763
AEV67025.1
Hypothetical protein.
  
     0.755
AEV67497.1
PFAM: Uncharacterized protein family UPF0027.
     0.739
AEV66770.1
Hypothetical protein; PFAM: Tetratricopeptide repeat; manually curated.
  
     0.736
AEV66796.1
PFAM: ATPase family associated with various cellular activities (AAA).
 
     0.732
AEV67386.1
PFAM: Protein of unknown function (DUF402).
  
     0.720
AEV67337.1
Putative S-layer protein; PFAM: S-layer homology domain.
  
     0.719
AEV69808.1
PFAM: Cohesin domain; manually curated.
  
     0.710
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.