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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV67443.1PFAM: Calcineurin-like phosphoesterase; Chromatin associated protein KTI12; TIGRFAM: polynucleotide kinase-phosphatase. (870 aa)    
Predicted Functional Partners:
AEV67442.1
PFAM: Methyltransferase domain; TIGRFAM: 3' terminal RNA ribose 2'-O-methyltransferase Hen1.
 
 
   0.996
AEV67649.1
Hypothetical protein.
  
     0.743
AEV69972.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
 
 
   0.726
AEV67439.1
TROVE domain-containing protein; PFAM: TROVE domain.
 
     0.723
AEV67300.1
Methyltransferase family protein; PFAM: Methyltransferase domain.
 
 
   0.714
AEV69423.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT).
   
   0.657
AEV70521.1
PFAM: Methyltransferase domain; TIGRFAM: pseudaminic acid biosynthesis-associated methylase.
   
   0.657
AEV69290.1
Hypothetical protein; PFAM: tRNAHis guanylyltransferase.
 
     0.652
AEV67444.1
PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase HisJ family.
       0.642
AEV67414.1
CBM6-containing protein,dockerin-like protein; PFAM: Dockerin type I repeat; Carbohydrate binding module (family 6).
  
   
 0.603
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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