STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV67451.1PFAM: ADP-ribosylglycohydrolase. (275 aa)    
Predicted Functional Partners:
AEV70172.1
PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family.
    
 
 0.689
AEV70383.1
PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter.
   
 
 0.678
AEV67453.1
Cytidyltransferase-related enzyme; PFAM: Cytidylyltransferase; TIGRFAM: nicotinamide-nucleotide adenylyltransferase, NadR type; cytidyltransferase-related domain.
     
 0.551
AEV67919.1
PFAM: Nitrogen regulatory protein P-II.
    
 
 0.513
AEV67920.1
PFAM: Nitrogen regulatory protein P-II.
    
 
 0.513
AEV68199.1
Nitrogen regulatory protein P-II family.
    
 
 0.513
AEV68744.1
Hypothetical protein.
    
 
 0.513
AEV70382.1
PFAM: Nitrogen regulatory protein P-II.
    
 
 0.513
AEV67452.1
PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC.
       0.467
AEV67450.1
PFAM: Putative redox-active protein (C_GCAxxG_C_C); TIGRFAM: C_GCAxxG_C_C family probable redox protein.
       0.443
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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