Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEV67473.1Histidine kinase,HAMP domain-containing protein,histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; manually curated. (476 aa)    
Predicted Functional Partners:
AEV67472.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 0.994
AEV67471.1
TIGRFAM: lantibiotic protection ABC transporter permease subunit, MutG family.
 
   
 0.926
AEV67470.1
TIGRFAM: lantibiotic protection ABC transporter permease subunit, MutE/EpiE family.
 
   
 0.924
AEV67271.1
PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
  
 
 0.873
AEV67469.1
PFAM: ABC transporter; TIGRFAM: gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit.
 
   
 0.845
AEV68650.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
  
 
 0.702
AEV68803.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
  
 
 0.676
AEV67736.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
  
 
 0.660
AEV68847.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
  
 
 0.654
AEV67177.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
 
 0.650
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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