Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEV67474.1PFAM: Predicted nucleotidyltransferase. (333 aa)    
Predicted Functional Partners:
AEV68408.1
PFAM: Cohesin domain.
  
     0.698
AEV68675.1
Hypothetical protein.
  
     0.694
AEV70635.1
Putative hydrolase or acyltransferase of alpha/beta superfamily; PFAM: PGAP1-like protein; manually curated.
  
     0.678
AEV69808.1
PFAM: Cohesin domain; manually curated.
  
     0.667
AEV68694.1
Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase; Dockerin type I repeat.
  
     0.624
AEV68937.1
Rhs family protein; PFAM: Bacterial Ig-like domain (group 2); RHS Repeat; Dockerin type I repeat; Bacterial SH3 domain; TIGRFAM: YD repeat (two copies).
  
     0.616
AEV67649.1
Hypothetical protein.
  
     0.605
AEV67709.1
Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Transglutaminase-like superfamily.
  
     0.604
AEV69257.1
RHS repeat-associated core domain protein; PFAM: RHS Repeat; Protein of unknown function (DUF1557); TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies).
  
     0.604
AEV69301.1
PA14 domain-containing protein; PFAM: PA14 domain.
  
     0.596
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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