STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV67494.1Hypothetical protein. (351 aa)    
Predicted Functional Partners:
AEV67495.1
PFAM: Uroporphyrinogen decarboxylase (URO-D); Belongs to the uroporphyrinogen decarboxylase family.
 
     0.855
AEV67489.1
PFAM: Uroporphyrinogen decarboxylase (URO-D); Belongs to the uroporphyrinogen decarboxylase family.
 
     0.669
AEV67199.1
PFAM: Bacterial regulatory proteins, lacI family; Bacterial extracellular solute-binding protein; family.
 
   
 0.652
AEV67197.1
Putative dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold.
 
  
 0.628
AEV67490.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: family.
 
   
 0.613
AEV68436.1
Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.610
AEV68816.1
Hypothetical protein.
 
     0.560
AEV67491.1
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporters; PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.540
birA
biotin-(acetyl-CoA carboxylase) ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
      
 0.522
AEV67492.1
ABC-type sugar transport system, ATPase component; PFAM: ABC transporter.
 
     0.483
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.