STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV67516.1Hypothetical protein. (372 aa)    
Predicted Functional Partners:
AEV69884.1
Hypothetical protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; manually curated.
  
  
 
0.926
AEV67568.1
Hypothetical protein.
  
  
 
0.900
AEV69885.1
ABC-type bacteriocin transporter; PFAM: Peptidase C39 family; ABC transporter; ABC transporter transmembrane region; TIGRFAM: ABC-type bacteriocin transporter; type I secretion system ABC transporter, HlyB family.
 
 
 0.898
AEV67517.1
Ig-like domain-containing surface protein; PFAM: Bacterial Ig-like domain (group 2).
 
     0.837
AEV67515.1
Hypothetical protein.
  
    0.787
AEV68686.1
ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain; PFAM: ABC transporter; ABC transporter transmembrane region.
  
 
 0.687
AEV67737.1
PFAM: Dockerin type I repeat; CotH protein.
  
 
 0.599
AEV69370.1
PFAM: CotH protein.
  
 
 0.599
AEV70271.1
PFAM: Outer membrane efflux protein.
  
 
 0.599
AEV70272.1
Hypothetical protein.
  
 
 0.599
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.