STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV67526.1PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region. (420 aa)    
Predicted Functional Partners:
AEV67525.1
Hypothetical protein; Manually curated.
 
  
 0.907
AEV67546.1
DNA segregation ATPase, FtsK/SpoIIIE family; PFAM: FtsK/SpoIIIE family; manually curated.
  
    0.778
AEV67547.1
DNA segregation ATPase, FtsK/SpoIIIE family; PFAM: Archaeal ATPase; FtsK/SpoIIIE family.
  
    0.778
AEV67541.1
PFAM: Tetratricopeptide repeat.
  
    0.774
AEV66770.1
Hypothetical protein; PFAM: Tetratricopeptide repeat; manually curated.
  
     0.756
AEV67453.1
Cytidyltransferase-related enzyme; PFAM: Cytidylyltransferase; TIGRFAM: nicotinamide-nucleotide adenylyltransferase, NadR type; cytidyltransferase-related domain.
 
    0.743
AEV69103.1
Hypothetical protein.
  
     0.743
AEV69960.1
Hypothetical protein.
  
     0.740
AEV69075.1
PFAM: Kelch motif; RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies).
 
   
 0.736
AEV67437.1
Hypothetical protein.
  
     0.729
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.