STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV67532.1DNA replication protein; PFAM: IstB-like ATP binding protein. (256 aa)    
Predicted Functional Partners:
AEV67533.1
Transposase; PFAM: Sugar-specific transcriptional regulator TrmB; Integrase core domain; manually curated.
 
    0.940
AEV67089.1
Transposase; PFAM: Sugar-specific transcriptional regulator TrmB; Integrase core domain.
 
    0.784
AEV68275.1
Transposase; PFAM: Sugar-specific transcriptional regulator TrmB; Integrase core domain.
 
    0.784
AEV68902.1
Transposase; PFAM: Sugar-specific transcriptional regulator TrmB; Integrase core domain.
 
    0.784
AEV69954.1
Transposase; PFAM: Integrase core domain.
    0.752
AEV68231.1
Transposase; PFAM: Integrase core domain.
 
    0.678
AEV66876.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.597
AEV68402.1
Transposase; PFAM: Integrase core domain.
 
    0.509
AEV68946.1
Transposase; PFAM: Integrase core domain.
 
    0.509
AEV67293.1
Transposase; PFAM: Integrase core domain.
    0.494
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.