STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV67539.1Hypothetical protein. (184 aa)    
Predicted Functional Partners:
AEV68408.1
PFAM: Cohesin domain.
    
   0.440
AEV69808.1
PFAM: Cohesin domain; manually curated.
    
   0.440
AEV69231.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme.
   
 
 0.435
AEV67086.1
Endoglucanase; PFAM: Cellulase (glycosyl hydrolase family 5); GDSL-like Lipase/Acylhydrolase; Dockerin type I repeat.
  
 
 0.419
AEV67271.1
PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
  
  
 0.416
AEV67414.1
CBM6-containing protein,dockerin-like protein; PFAM: Dockerin type I repeat; Carbohydrate binding module (family 6).
  
 
 0.411
AEV69827.1
Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase; Dockerin type I repeat; Carbohydrate binding module (family 6).
  
 
 0.411
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.