STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV67579.1Beta-mannanase; PFAM: Dockerin type I repeat; Glycosyl hydrolase family 26; Belongs to the glycosyl hydrolase 26 family. (590 aa)    
Predicted Functional Partners:
AEV68200.1
PDK repeat-containing protein; PFAM: Dockerin type I repeat; PKD domain.
 
  
0.950
AEV68433.1
Beta-mannanase; PFAM: Dockerin type I repeat; Glycosyl hydrolase family 26; Belongs to the glycosyl hydrolase 26 family.
  
  
0.924
AEV68786.1
Beta-1,4-xylanase; PFAM: Glycosyl hydrolase family 10; Domain of unknown function (DUF1083); Carbohydrate binding domain.
  
   
 0.848
AEV68436.1
Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family.
     
 0.808
AEV69809.1
PFAM: Cellulose binding domain; Cohesin domain.
  
    0.745
AEV69630.1
PFAM: Carbohydrate binding module (family 6); Glycosyl hydrolases family 11; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
   
 0.744
AEV67526.1
PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region.
  
     0.721
AEV67525.1
Hypothetical protein; Manually curated.
  
     0.705
AEV67541.1
PFAM: Tetratricopeptide repeat.
  
     0.697
AEV67546.1
DNA segregation ATPase, FtsK/SpoIIIE family; PFAM: FtsK/SpoIIIE family; manually curated.
  
     0.696
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.