STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV67649.1Hypothetical protein. (131 aa)    
Predicted Functional Partners:
AEV67442.1
PFAM: Methyltransferase domain; TIGRFAM: 3' terminal RNA ribose 2'-O-methyltransferase Hen1.
  
 
 0.760
AEV69290.1
Hypothetical protein; PFAM: tRNAHis guanylyltransferase.
  
     0.752
AEV69231.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme.
 
   
 0.746
AEV67443.1
PFAM: Calcineurin-like phosphoesterase; Chromatin associated protein KTI12; TIGRFAM: polynucleotide kinase-phosphatase.
  
     0.743
AEV69291.1
Putative kinase.
  
     0.710
AEV69873.1
PFAM: Glutathionylspermidine synthase.
  
     0.650
AEV68465.1
Polyketide synthase family protein; PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain.
 
 
 
 0.649
kptA
RNA:NAD 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
  
     0.636
AEV66929.1
PFAM: Reverse transcriptase (RNA-dependent DNA polymerase).
  
     0.613
AEV67474.1
PFAM: Predicted nucleotidyltransferase.
  
     0.605
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.