STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV67651.1PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain. (619 aa)    
Predicted Functional Partners:
AEV68629.1
Chemotaxis protein histidine kinase-like protein; PFAM: CheW-like domain; P2 response regulator binding domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain.
 
 0.983
AEV67772.1
Chemotaxis protein histidine kinase-like protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.981
AEV67650.1
Chemotaxis signal transduction protein; PFAM: CheW-like domain.
 
 0.980
AEV68543.1
Chemotaxis protein histidine kinase-like protein; PFAM: CheW-like domain; P2 response regulator binding domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain.
 
 0.980
cheD
Chemotaxis protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
  0.969
AEV68628.1
Chemotaxis signal transduction protein; PFAM: CheW-like domain.
 
 0.963
AEV67777.1
Chemotaxis signal transduction protein; PFAM: CheW-like domain.
 
 0.962
AEV68542.1
Chemotaxis signal transduction protein; PFAM: CheW-like domain.
 
 0.962
AEV69201.1
Chemotaxis signal transduction protein; PFAM: CheW-like domain.
 
 0.962
AEV68627.1
Methylase of chemotaxis methyl-accepting protein; PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain.
 
 0.944
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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