Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEV67678.1PFAM: Copper amine oxidase N-terminal domain; Transglutaminase-like superfamily; Leucine Rich Repeat. (782 aa)    
Predicted Functional Partners:
AEV67273.1
PFAM: Glycosyl transferase family 2.
   
 
 0.616
AEV70386.1
PFAM: Glycosyl transferase family 2.
   
 
 0.616
AEV67675.1
ABC-type metal ion transport system, periplasmic component/surface adhesin; PFAM: Periplasmic solute binding protein family.
       0.605
AEV67676.1
ATPase component of Mn/Zn ABC-type transporter; PFAM: ABC transporter.
       0.605
AEV67677.1
ABC-type Mn2+/Zn2+ transport system, permease component; PFAM: ABC 3 transport family.
       0.605
AEV67680.1
Hypothetical protein.
 
     0.536
AEV69291.1
Putative kinase.
  
     0.484
AEV69290.1
Hypothetical protein; PFAM: tRNAHis guanylyltransferase.
  
     0.475
AEV67679.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
    0.474
AEV68387.1
Uncharacterized protein containing chitin-binding domain type 3; PFAM: S-layer homology domain; PKD domain; Fibronectin type III domain.
  
     0.446
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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