Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEV67679.1ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter. (242 aa)    
Predicted Functional Partners:
AEV67680.1
Hypothetical protein.
 
    0.965
AEV68648.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
    
0.755
atpC
ATP synthase, F1 epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
   0.474
AEV67678.1
PFAM: Copper amine oxidase N-terminal domain; Transglutaminase-like superfamily; Leucine Rich Repeat.
  
    0.474
AEV67676.1
ATPase component of Mn/Zn ABC-type transporter; PFAM: ABC transporter.
 
   
0.458
atpD-2
ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
   
 
 0.452
AEV70029.1
Putative membrane protein; PFAM: ABC-2 type transporter.
  
  
 0.452
AEV68486.1
Hypothetical protein.
 
   0.440
AEV69231.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme.
  
  
 0.436
AEV67677.1
ABC-type Mn2+/Zn2+ transport system, permease component; PFAM: ABC 3 transport family.
       0.401
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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