STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV67759.1Hypothetical protein. (112 aa)    
Predicted Functional Partners:
AEV67760.1
Hypothetical protein.
  
  
 0.856
AEV67818.1
Hypothetical protein.
  
     0.595
AEV68668.1
PFAM: Stage III sporulation protein AE (spore_III_AE); TIGRFAM: stage III sporulation protein AE.
  
     0.562
AEV68832.1
PFAM: Nucleoside recognition; TIGRFAM: sporulation integral membrane protein YlbJ.
  
   
 0.543
AEV67891.1
PFAM: Sporulation and spore germination.
  
     0.539
AEV68135.1
PFAM: Protein of unknown function (DUF2953); manually curated.
  
     0.512
AEV68115.1
PFAM: Integral membrane protein DUF95; TIGRFAM: stage II sporulation protein M.
  
     0.510
AEV67758.1
Putative metal-dependent hydrolase; PFAM: Protein of unknown function DUF45.
       0.488
AEV68671.1
PFAM: Stage III sporulation protein AB (spore_III_AB); TIGRFAM: stage III sporulation protein AB.
  
     0.488
AEV67765.1
PFAM: Pyruvate kinase, barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; Belongs to the pyruvate kinase family.
       0.487
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.