STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV67866.1PFAM: Protein of unknown function (DUF3048). (366 aa)    
Predicted Functional Partners:
AEV67086.1
Endoglucanase; PFAM: Cellulase (glycosyl hydrolase family 5); GDSL-like Lipase/Acylhydrolase; Dockerin type I repeat.
   
 
 0.718
AEV69231.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme.
  
 
 0.626
AEV69807.1
Putative S-layer protein; PFAM: Cohesin domain; S-layer homology domain; manually curated.
  
 
 
 0.585
AEV68943.1
Putative S-layer protein; PFAM: S-layer homology domain.
 
 
 0.552
AEV68387.1
Uncharacterized protein containing chitin-binding domain type 3; PFAM: S-layer homology domain; PKD domain; Fibronectin type III domain.
  
 
 
 0.522
AEV69166.1
PFAM: Copper amine oxidase N-terminal domain.
  
   0.514
AEV69167.1
PFAM: Copper amine oxidase N-terminal domain.
  
   0.510
AEV67546.1
DNA segregation ATPase, FtsK/SpoIIIE family; PFAM: FtsK/SpoIIIE family; manually curated.
   
 
 0.499
AEV67547.1
DNA segregation ATPase, FtsK/SpoIIIE family; PFAM: Archaeal ATPase; FtsK/SpoIIIE family.
   
 
 0.499
AEV68053.1
DNA segregation ATPase, FtsK/SpoIIIE family; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; manually curated.
   
 
 0.499
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.