STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV67897.1Hypothetical protein. (274 aa)    
Predicted Functional Partners:
AEV67896.1
DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase; manually curated.
 
 
   0.979
AEV67895.1
Hypothetical protein.
 
 
   0.961
AEV67898.1
Putative exonuclease, RecJ; PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ.
 
    0.835
AEV68408.1
PFAM: Cohesin domain.
  
     0.728
AEV67709.1
Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Transglutaminase-like superfamily.
  
     0.704
AEV69808.1
PFAM: Cohesin domain; manually curated.
  
     0.677
AEV70635.1
Putative hydrolase or acyltransferase of alpha/beta superfamily; PFAM: PGAP1-like protein; manually curated.
  
     0.639
AEV70190.1
Prophage antirepressor; PFAM: BRO family, N-terminal domain; Phage antirepressor protein KilAC domain.
     
 0.637
AEV68465.1
Polyketide synthase family protein; PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain.
 
     0.631
AEV69119.1
Hypothetical protein.
  
     0.623
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.